It's a misconception that wild animals don't get sick drinking dirty water. Humans can drink dirty water, they just get really sick - animals do too. Some have microbiomes that do offer some protection, but, animals get sick from dirty water all the time.
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We've evolved to spend more energy on our brain and intelligence. Animals can have better immune systems, plus they'll build up a resistance to the pathogens.
People who constantly drink dirty water will also develop resistance
They are just sick like all the damn time.